Publications

Kamalaker Dadi, Gael Varoquaux, Josselin Houenou, Danilo Bzdok, Bertrand Thirion, Denis Engemann (2021). Population modeling with machine learning can enhance measures of mental health. GigaScience, 10 (10), October 2021, giab071.

Florence Baillin, Aline Lefebvre, Amandine Pedoux, Yann Beauxis, Denis A Engemann, Anna Maruani, Frederique Amsellem, JA Scott Kelso, Thomas Bourgeron, Richard Delorme, Guillaume Dumas (2020). Interactive Psychometrics for Autism With the Human Dynamic Clamp: Interpersonal Synchrony From Sensorimotor to Sociocognitive Domains. Frontiers in Psychiatry.

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Cyril Touchard, Jérôme Cartailler, Charlotte Levé, José Serrano, David Sabbagh, Elsa Manquat, Jona Joachim, Joaquim Mateo, Etienne Gayat, Denis Engemann, Fabrice Vallée (2020). Propofol Requirement and EEG Alpha Band Power During General Anesthesia Provide Complementary Views on Preoperative Cognitive Decline. Frontiers in Aging Neuroscience.

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Hubert Banville, Omar Chehab, Aapo Hyvarinen, Denis Engemann, Alexandre Gramfort (2020). Uncovering the structure of clinical EEG signals with self-supervised learning. Journal of Neural Engineering.

Danilo Bzdok, Denis Engemann, Bertrand Thirion (2020). Inference and Prediction Diverge in Biomedicine. bioRxiv preprint.

Denis A Engemann, Oleh Kozynets, David Sabbagh, Guillaume Lemaître, Gael Varoquaux, Franz Liem, Alexandre Gramfort (2020). Combining magnetoencephalography with MRI enhances learning of surrogate-biomarkers. eLife.

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David Sabbagh, Pierre Ablin, Gael Varoquaux, Alexandre Gramfort, Denis A Engemann (2020). Predictive regression modeling with MEG/EEG: from source power to signals and cognitive states. NeuroImage.

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Bertrand Hermann, Federico Raimondo, Lukas Hirsch, Yu Huang, Mélanie Denis-Valente, Pauline Pérez, Denis Engemann, Frédéric Faugeras, Nicolas Weiss, Sophie Demeret, Benjamin Rohaut, Lucas C Parra, Jacobo D Sitt, Lionel Naccache (2020). Combined behavioral and electrophysiological evidence for a direct cortical effect of prefrontal tDCS on disorders of consciousness. Scientific Reports.

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David Sabbagh, Pierre Ablin, Gael Varoquaux, Alexandre Gramfort, Denis A. Engemann (2019). Manifold-regression to predict from MEG/EEG brain signals without source modeling. arXiv preprint [accepted for NeurIPS 2019].

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Lorenz Esch, Christoph Dinh, Eric Larson, Denis Engemann, Mainak Jas, Sheraz Khan, Alexandre Gramfort, Matti Hämäläinen (2019). MNE: Software for Acquiring, Processing,and Visualizing MEG/EEG Data. Frontiers in neuroscience 2013, 7, p 267.

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Daria La Rocca, Philippe Ciuciu, Denis-Alexander Engemann, Virginie Van Wassenhove (2019). Emergence of β and γ networks following multisensory training. Neuroimage 2019.

Sami Abboud, Denis-Alexander Engemann, Laurent Cohen (2019). Semantic coding in the occipital cortex of early blind individuals. bioRxiv preprint.

Denis A Engemann, Federico Raimondo, Jean-Remi King, Benjamin Rohaut, Gilles Louppe, Frédéric Faugeras, Jitka Annen, Helena Cassol, Olivia Gosseries, Diego Fernandez-Slezak, Steven Laureys, Lionel Naccache, Stanislas Dehaene, Jacobo D Sitt (2018). Robust EEG-based cross-site and cross-protocol classification of states of consciousness. Brain 141 (11), pp 3179–319.

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Jean-Remi King, Laura Gwilliams, Chris Holdgraf, Jona Sassenhagen, Alexandre Barachant, Denis Engemann, Eric Larson, Alexandre Gramfort (2018). Encoding and Decoding Neuronal Dynamics: Methodological Framework to Uncover the Algorithms of Cognition. HAL.

Mainak Jas, Eric Larson, Denis A Engemann, Jaakko Leppäkangas, Samu Taulu, Matti Hämäläinen, Alexandre Gramfort (2018). A reproducible MEG/EEG group study with the MNE software: recommendations, quality assessments, and good practices. Frontiers in neuroscience 2018, 12.

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Mainak Jas, Denis A Engemann, Yousra Bekhti, Federico Raimondo, Alexandre Gramfort (2017). Autoreject: Automated artifact rejection for MEG and EEG data. Neuroimage 2017, 159, pp 417-429.

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Federico Raimondo, Benjamin Rohaut, Athena Demertzi, Mélanie Valente, Denis A Engemann, Moti Salti, Diego Fernandez-Slezak, Lionel Naccache, Jacobo D Sitt (2017). Brain–heart interactions reveal consciousness in noncommunicating patients. Annals of neurology 82 (4), pp 578-591.

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Gael Varoquaux, Pradeep Reddy Raamana, Denis A Engemann, Andrés Hoyos-Idrobo, Yannick Schwartz, Bertrand Thirion (2017). Assessing and tuning brain decoders: cross-validation, caveats, and guidelines. Neuroimage 2017, 145, pp 166-179.

Stefania de Vito, Maria Adriana Neroni, Jean-François Bonnefon, Sergio Della Sala, Alessandra Capuozzo, Denis A Engemann, Maria Antonella Brandimonte (2017). Thoughts of death disrupt foresight: the'ostrich bias'. PsyArXiv preprint.

Carl-Friedrich Schleussner, Jonathan F. Donges, Denis A. Engemann, Anders Levermann (2016). Clustered marginalization of minorities during social transitions induced by co-evolution of behaviour and network structure. Scientific Reports 2016, 6, 30790.

Mainak Jas, Denis Engemann, Federico Raimondo, Yousra Bekhti, Alexandre Gramfort (2016). Automated rejection and repair of bad trials in MEG/EEG. 2016 International Workshop on Pattern Recognition in Neuroimaging (PRNI).

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Lionel Naccache, Jacobo Sitt, Jean-Remi King, Benjamin Rohaut, Frédéric Faugeras, Srivas Chennu, Mélanie Strauss, Mélanie Valente, Denis Engemann, Federico Raimondo, Athena Demertzi, Tristan Bekinschtein, Stanislas Dehaene (2016). Reply: Replicability and impact of statistics in the detection of neural responses of consciousness. Brain 2016, 139 (6), p e31.

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Denis Engemann, Federico Raimondo, Jean-Remi King, Mainak Jas, Alexandre Gramfort, Stanislas Dehaene, Lionel Naccache, Jacobo Sitt (2015). Automated measurement and prediction of consciousness in vegetative and minimally conscious patients. ICML Workshop on Statistics, Machine Learning and Neuroscience (Stamlins 2015)..

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Lionel Naccache, Jean-Remi King, Jacobo Sitt, Denis Engemann, Imen El Karoui, Benjamin Rohaut, Frédéric Faugeras, Srivas Chennu, Mélanie Strauss, Tristan Bekinschtein, Stanislas Dehaene (2015). Neural detection of complex sound sequences or of statistical regularities in the absence of consciousness?. Brain 2015, 138 (12), p e395.

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Denis A Engemann (2015). Neuromagnetic Decomposition of Social Interaction. University of Cologne.

Denis Engemann, Daniel Strohmeier, Eric Larson, Alexandre Gramfort (2015). Mind the noise covariance when localizing brain sources with M/EEG. 2015 International Workshop on Pattern Recognition in NeuroImaging.

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Denis A Engemann, Alexandre Gramfort (2015). Automated model selection in covariance estimation and spatial whitening of MEG and EEG signals. Neuroimage 2015, 108, pp 328-342.

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Alexandre Gramfort, Martin Luessi, Eric Larson, Denis A Engemann, Daniel Strohmeier, Christian Brodbeck, Lauri Parkkonen, Matti S Hämäläinen (2014). MNE software for processing MEG and EEG data. Neuroimage 2014, 86, pp 446-460.

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Alexandre Gramfort, Martin Luessi, Eric Larson, Denis A Engemann, Daniel Strohmeier, Christian Brodbeck, Roman Goj, Mainak Jas, Teon Brooks, Lauri Parkkonen, Matti Hämäläinen (2014). MEG and EEG data analysis with MNE-Python. Frontiers in neuroscience 2013, 7, p 267.

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Bahar Köymen, Elena Lieven, Denis A Engemann, Hannes Rakoczy, Felix Warneken, Michael Tomasello (2013). Children's norm enforcement in their interactions with peers. Child Development 2017, 85 (3), pp 1108-1122.

Danilo Bzdok, Robert Langner, Leonhard Schilbach, Denis A Engemann, Angela R Laird, Peter T Fox, Simon Eickhoff (2013). Segregation of the human medial prefrontal cortex in social cognition. Frontiers in human neuroscience 2013, 7, p 232.

Denis A Engemann, Danilo Bzdok, Simon B Eickhoff, Kai Vogeley, Leonhard Schilbach (2012). Games people play—toward an enactive view of cooperation in social neuroscience. Frontiers in human neuroscience 2012, 6, p 148.